alist 6.31, aligned listing of book:
* 2001/06/18 10:29:41, 1999/05/04 14:41:13,
  OxyR version = 3.04 of oxyr.3.inst 2001 June 1
piece names from:
* 2001/06/18 10:29:41, 1999/05/04 14:41:13,
  OxyR version = 3.04 of oxyr.3.inst 2001 June 1
The alignment is by delila instructions
The book is from:       -200 to 200
This alignment is from: -25 to 25

                           ----------------                   ++++++++++++++++
                           2222221111111111--------- +++++++++1111111111222222
                           543210987654321098765432101234567890123456789012345
                           ................................................... bits
hemH   U00096  497211 +  1 tcctttttctgatttgacctctcacagcaattagttcttcttcctcacttt 10.3
       U00096  497211 -  2 aaagtgaggaagaagaactaattgctgtgagaggtcaaatcagaaaaagga 10.3
dsbG   U00096  637851 +  3 tcgagtaaaaggcataacctatcactgtcataggtaagagcttagatcagg 29.3
       U00096  637851 -  4 cctgatctaagctcttacctatgacagtgataggttatgccttttactcga 29.3
ahpC   U00096  638089 +  5 aaggttgtaaggtaaaacttatcgatttgataatggaaacgcattagccga 21.8
       U00096  638089 -  6 tcggctaatgcgtttccattatcaaatcgataagttttaccttacaacctt 21.8
fur    U00096  710103 +  7 aaagttacaaatttgtagcaattattttgattggcattatctattaatacg 26.0
       U00096  710103 -  8 cgtattaatagataatgccaatcaaaataattgctacaaatttgtaacttt 26.0
dps    U00096  848228 +  9 ccgctattctggctgttcctatcacactaatagtggtaacaagcgtgaaaa 13.1
       U00096  848228 - 10 ttttcacgcttgttaccactattagtgtgataggaacagccagaatagcgg 13.1
grxA   U00096  890054 + 11 gctgaaagtaggtttaacctgttgcattaattgctaaaagctataactgtt 27.0
       U00096  890054 - 12 aacagttatagcttttagcaattaatgcaacaggttaaacctactttcagc 27.0
sufA   U00096 1762663 + 13 aagttgtattgaaaatgactatttaagagataggtaaaaaagtgcagcgtt 17.4
       U00096 1762663 - 14 aacgctgcacttttttacctatctcttaaatagtcattttcaatacaactt 17.4
flu    U00096 2069355 + 15 gaataaaacgatcaatatctattttatcgatcgtttatatcgatcgataag 17.3
       U00096 2069355 - 16 cttatcgatcgatataaacgatcgataaaatagatattgatcgttttattc 17.3
O16    U00096 2467337 + 17 taaattgaaaggtcatattgattcaattgatagctatgagtatataagttc 23.0
       U00096 2467337 - 18 gaacttatatactcatagctatcaattgaatcaatatgacctttcaattta 23.0
trxC   U00096 2716640 + 19 tcgtaccaaagcctgcgactatcatacctattgaataaaacagattgttgt 11.4
       U00096 2716640 - 20 acaacaatctgttttattcaataggtatgatagtcgcaggctttggtacga 11.4
gorA   U00096 3643862 + 21 agctggatcgtgccggagtaattgcagccattgctggcacctattacgtct  7.4
       U00096 3643862 - 22 agacgtaataggtgccagcaatggctgcaattactccggcacgatccagct  7.4
katG   U00096 4131337 + 23 caatatgtaagatctcaactatcgcatccgtggattaattcaattataact 17.6
       U00096 4131337 - 24 agttataattgaattaatccacggatgcgatagttgagatcttacatattg 17.6
oxyR   U00096 4156029 + 25 agggataatcgttcattgctattctacctatcgccatgaactatcgtggcg 15.3
       U00096 4156029 - 26 cgccacgatagttcatggcgataggtagaatagcaatgaacgattatccct 15.3
fhuF.1 U00096 4603273 + 27 ctaaatgataatgattgctaatcatagcgataggtttacccgatagcaagg 18.3
       U00096 4603273 - 28 ccttgctatcgggtaaacctatcgctatgattagcaatcattatcatttag 18.3
fhuF.2 U00096 4603357 + 29 atatgatattggttatcattatcaatgaaagagatgaaatcatgttgcaac 19.1
       U00096 4603357 - 30 gttgcaacatgatttcatctctttcattgataatgataaccaatatcatat 19.1
mu mom V01463      68 + 31 agaaaacgacgatcgaatcaattaaatcgatcggtaatacagatcgattat 19.8
       V01463      68 - 32 ataatcgatctgtattaccgatcgatttaattgattcgatcgtcgttttct 19.8