* Restriction enzyme list for Delila search program * created by: * version = 1.03 of mkenzyme 1997 June 4 * Input is Staden format from ftp://vent.neb.com/pub/rebase/ * This file is input to the Delila Search program: * search < enzyme * The searchfeatures then can be used with Lister. * Note: Some enzymes have an odd format and cannot be processed. * *REBASE version 705 staden.705 * *<><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><> * <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><> * * Dr. Richard J. Roberts Restriction Enzyme Database * Copyright (c) New England BioLabs, Inc. 1997 * All rights reserved. * * <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><> *<><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><> * *Rich Roberts Apr 30 97 * * DELETED CASES * these cases cannot be handled by the mkenzyme program yet * "AccBSI" ccg^ctc/gag'cgg * "AciI" c^cgc/g'cgg * "AclWI" ggatcnnnn^n/'nnnnngatcc * "Alw26I" gtctcn^nnnn/'nnnnngagac * "AlwI" ggatcnnnn^n/'nnnnngatcc * "AsuHPI" ggtgannnnnnnn^/n'nnnnnnntcacc * "BbsI" gaagacnn^nnnn/'nnnnnngtcttc * "BbvI" gcagcnnnnnnnn^nnnn/'nnnnnnnnnnnngctgc * "BcgI" cgannnnnntgcnnnnnnnnnnnn^/nn'nnnnnnnnnngcannnnnntcg * "BcgI" gcannnnnntcgnnnnnnnnnnnn^/nn'nnnnnnnnnncgannnnnntgc * "BciVI" ggatacnnnnnn^/n'nnnnngtatcc * "BpiI" gaagacnn^nnnn/'nnnnnngtcttc * "BpmI" ctggagnnnnnnnnnnnnnnnn^/nn'nnnnnnnnnnnnnnctccag * "Bpu10I" cc^tnagc/gc'tnagg * "BpuAI" gaagacnn^nnnn/'nnnnnngtcttc * "BsaI" ggtctcn^nnnn/'nnnnngagacc * "BsaMI" gaatgcn^/ng'cattc * "BscCI" gaatgcn^/ng'cattc * "Bse1I" actggn^/nc'cagt * "Bse3DI" gcaatgnn^/nn'cattgc * "BseGI" ggatgnn^/nn'catcc * "BseNI" actggn^/nc'cagt * "BseRI" gaggagnnnnnnnnnn^/nn'nnnnnnnnctcctc * "BsgI" gtgcagnnnnnnnnnnnnnnnn^/nn'nnnnnnnnnnnnnnctgcac * "BsmAI" gtctcn^nnnn/'nnnnngagac * "BsmBI" cgtctcn^nnnn/'nnnnngagacg * "BsmFI" gggacnnnnnnnnnn^nnnn/'nnnnnnnnnnnnnngtccc * "BsmI" gaatgcn^/ng'cattc * "BspMI" acctgcnnnn^nnnn/'nnnnnnnngcaggt * "BsrBI" ccg^ctc/gag'cgg * "BsrDI" gcaatgnn^/nn'cattgc * "BsrI" actggn^/nc'cagt * "BsrSI" actggn^/nc'cagt * "BssSI" c^acgag/c'tcgtg * "Bst2BI" c^acgag/c'tcgtg * "Bst71I" gcagcnnnnnnnn^nnnn/'nnnnnnnnnnnngctgc * "BstF5I" ggatgnn^/nn'catcc * "Bsu6I" ctcttcn^nnn/'nnnngaagag * "Eam1104I" ctcttcn^nnn/'nnnngaagag * "EarI" ctcttcn^nnn/'nnnngaagag * "Eco31I" ggtctcn^nnnn/'nnnnngagacc * "Eco57I" ctgaagnnnnnnnnnnnnnnnn^/nn'nnnnnnnnnnnnnncttcag * "Esp3I" cgtctcn^nnnn/'nnnnngagacg * "FauI" cccgcnnnn^nn/'nnnnnngcggg * "FokI" ggatgnnnnnnnnn^nnnn/'nnnnnnnnnnnnncatcc * "GsuI" ctggagnnnnnnnnnnnnnnnn^/nn'nnnnnnnnnnnnnnctccag * "HgaI" gacgcnnnnn^nnnnn/'nnnnnnnnnngcgtc * "HphI" ggtgannnnnnnn^/n'nnnnnnntcacc * "Ksp632I" ctcttcn^nnn/'nnnngaagag * "MboII" gaagannnnnnnn^/n'nnnnnnntcttc * "MnlI" cctcnnnnnnn^/n'nnnnnngagg * "Mva1269I" gaatgcn^/ng'cattc * "PleI" gagtcnnnn^n/'nnnnngactc * "SapI" gctcttcn^nnn/'nnnngaagagc * "SfaNI" gcatcnnnnn^nnnn/'nnnnnnnnngatgc "AatI" agg^cct "AatII" gacgt^c "AauI" t^gtaca "Acc113I" agt^act "Acc16I" tgc^gca "Acc65I" g^gtacc "AccB1I" g^gyrcc "AccB7I" ccannnn^ntgg "AccI" gt^mkac "AccII" cg^cg "AccIII" t^ccgga "AclI" aa^cgtt "AclNI" a^ctagt "AcsI" r^aatty "AcyI" gr^cgyc "AfaI" gt^ac "AfeI" agc^gct "AflII" c^ttaag "AflIII" a^crygt "AgeI" a^ccggt "AhdI" gacnnn^nngtc "AluI" ag^ct "Alw21I" gwgcw^c "Alw44I" g^tgcac "AlwNI" cagnnn^ctg "Ama87I" c^ycgrg "AocI" cc^tnagg "Aor51HI" agc^gct "ApaI" gggcc^c "ApaLI" g^tgcac "ApoI" r^aatty "AscI" gg^cgcgcc "AseI" at^taat "AsiAI" a^ccggt "AsnI" at^taat "Asp700I" gaann^nnttc "Asp718I" g^gtacc "AspEI" gacnnn^nngtc "AspHI" gwgcw^c "AspI" gacn^nngtc "AspLEI" gcg^c "AspS9I" g^gncc "AsuC2I" cc^sgg "AsuNHI" g^ctagc "AvaI" c^ycgrg "AvaII" g^gwcc "AviII" tgc^gca "AvrII" c^ctagg "AxyI" cc^tnagg "BalI" tgg^cca "BamHI" g^gatcc "BanI" g^gyrcc "BanII" grgcy^c "BanIII" at^cgat "BbeI" ggcgc^c "BbiII" gr^cgyc "BbrPI" cac^gtg "BbuI" gcatg^c "Bbv12I" gwgcw^c "BclI" t^gatca "BcnI" cc^sgg "BcoI" c^ycgrg "BfaI" c^tag "BfmI" c^tryag "BfrI" c^ttaag "BglI" gccnnnn^nggc "BglII" a^gatct "BlnI" c^ctagg "BlpI" gc^tnagc "Bme18I" g^gwcc "BmyI" gdgch^c "Bpu1102I" gc^tnagc "Bpu14I" tt^cgaa "Bsa29I" at^cgat "BsaAI" yac^gtr "BsaBI" gatnn^nnatc "BsaHI" gr^cgyc "BsaJI" c^cnngg "BsaOI" cgry^cg "BsaWI" w^ccggw "Bsc4I" ccnnnnn^nngg "BscBI" ggn^ncc "BscFI" gatc "BscI" at^cgat "Bse118I" r^ccggy "Bse21I" cc^tnagg "Bse8I" gatnn^nnatc "BseAI" t^ccgga "BseCI" at^cgat "BseDI" c^cnngg "BseLI" ccnnnnn^nngg "BsePI" g^cgcgc "BseX3I" c^ggccg "Bsh1236I" cg^cg "Bsh1285I" cgry^cg "Bsh1365I" gatnn^nnatc "BshI" gg^cc "BshNI" g^gyrcc "BsiBI" gatnn^nnatc "BsiCI" tt^cgaa "BsiEI" cgry^cg "BsiHKAI" gwgcw^c "BsiLI" cc^wgg "BsiMI" t^ccgga "BsiQI" t^gatca "BsiSI" c^cgg "BsiWI" c^gtacg "BsiXI" at^cgat "BsiYI" ccnnnnn^nngg "BsiZI" g^gncc "BslI" ccnnnnn^nngg "BsoBI" c^ycgrg "Bsp106I" at^cgat "Bsp119I" tt^cgaa "Bsp120I" g^ggccc "Bsp1286I" gdgch^c "Bsp13I" t^ccgga "Bsp1407I" t^gtaca "Bsp143I" ^gatc "Bsp143II" rgcgc^y "Bsp1720I" gc^tnagc "Bsp19I" c^catgg "Bsp68I" tcg^cga "BspA2I" c^ctagg "BspCI" cgat^cg "BspDI" at^cgat "BspEI" t^ccgga "BspHI" t^catga "BspLI" ggn^ncc "BspLU11I" a^catgt "BspTI" c^ttaag "BspXI" at^cgat "BsrBRI" gatnn^nnatc "BsrFI" r^ccggy "BsrGI" t^gtaca "BssAI" r^ccggy "BssHII" g^cgcgc "BssKI" ^ccngg "BssNAI" gta^tac "BssT1I" c^cwwgg "Bst1107I" gta^tac "Bst2UI" cc^wgg "Bst4CI" acn^gt "Bst98I" c^ttaag "BstACI" gr^cgyc "BstAPI" gcannnn^ntgc "BstBAI" yac^gtr "BstBI" tt^cgaa "BstDEI" c^tnag "BstDSI" c^crygg "BstEII" g^gtnacc "BstH2I" rgcgc^y "BstHPI" gtt^aac "BstMCI" cgry^cg "BstNI" cc^wgg "BstNSI" rcatg^y "BstOI" cc^wgg "BstPI" g^gtnacc "BstSFI" c^tryag "BstSNI" tac^gta "BstUI" cg^cg "BstX2I" r^gatcy "BstXI" ccannnnn^ntgg "BstYI" r^gatcy "BstZ17I" gta^tac "BstZI" c^ggccg "Bsu15I" at^cgat "Bsu36I" cc^tnagg "BsuRI" gg^cc "Cac8I" gcn^ngc "CbiI" tt^cgaa "CciNI" gc^ggccgc "CelII" gc^tnagc "CfoI" gcg^c "Cfr10I" r^ccggy "Cfr13I" g^gncc "Cfr42I" ccgc^gg "Cfr9I" c^ccggg "CfrI" y^ggccr "ClaI" at^cgat "CpoI" cg^gwccg "Csp45I" tt^cgaa "Csp6I" g^tac "CspI" cg^gwccg "CviJI" rg^cy "CvnI" cc^tnagg "DdeI" c^tnag "DpnI" ga^tc "DpnII" ^gatc "DraI" ttt^aaa "DraII" rg^gnccy "DraIII" cacnnn^gtg "DrdI" gacnnnn^nngtc "DsaI" c^crygg "DseDI" gacnnnn^nngtc "EaeI" y^ggccr "EagI" c^ggccg "Eam1105I" gacnnn^nngtc "Ecl136II" gag^ctc "EclHKI" gacnnn^nngtc "EclXI" c^ggccg "Eco105I" tac^gta "Eco130I" c^cwwgg "Eco147I" agg^cct "Eco24I" grgcy^c "Eco255I" agt^act "Eco32I" gat^atc "Eco47I" g^gwcc "Eco47III" agc^gct "Eco52I" c^ggccg "Eco64I" g^gyrcc "Eco72I" cac^gtg "Eco81I" cc^tnagg "Eco88I" c^ycgrg "Eco91I" g^gtnacc "EcoICRI" gag^ctc "EcoNI" cctnn^nnnagg "EcoO109I" rg^gnccy "EcoO65I" g^gtnacc "EcoRI" g^aattc "EcoRII" ^ccwgg "EcoRV" gat^atc "EcoT14I" c^cwwgg "EcoT22I" atgca^t "EcoT38I" grgcy^c "EgeI" ggc^gcc "EheI" ggc^gcc "ErhI" c^cwwgg "Esp1396I" ccannnn^ntgg "FauNDI" ca^tatg "FbaI" t^gatca "Fnu4HI" gc^ngc "FriOI" grgcy^c "FseI" ggccgg^cc "Fsp4HI" gc^ngc "FspI" tgc^gca "HaeII" rgcgc^y "HaeIII" gg^cc "HapII" c^cgg "HgiEI" g^gwcc "HhaI" gcg^c "Hin1I" gr^cgyc "Hin2I" c^cgg "Hin6I" g^cgc "HincII" gty^rac "HindII" gty^rac "HindIII" a^agctt "HinfI" g^antc "HinP1I" g^cgc "HpaI" gtt^aac "HpaII" c^cgg "Hsp92I" gr^cgyc "Hsp92II" catg^ "HspAI" g^cgc "ItaI" gc^ngc "KasI" g^gcgcc "Kpn2I" t^ccgga "KpnI" ggtac^c "Ksp22I" t^gatca "KspI" ccgc^gg "Kzo9I" ^gatc "LspI" tt^cgaa "MaeI" c^tag "MaeII" a^cgt "MaeIII" ^gtnac "MamI" gatnn^nnatc "MboI" ^gatc "MfeI" c^aattg "MflI" r^gatcy "MlsI" tgg^cca "MluI" a^cgcgt "MluNI" tgg^cca "Mly113I" gg^cgcc "Mph1103I" atgca^t "MroI" t^ccgga "MroNI" g^ccggc "MroXI" gaann^nnttc "MscI" tgg^cca "MseI" t^taa "MslI" caynn^nnrtg "Msp17I" gr^cgyc "MspA1I" cmg^ckg "MspCI" c^ttaag "MspI" c^cgg "MspR9I" cc^ngg "MunI" c^aattg "MvaI" cc^wgg "MvnI" cg^cg "MwoI" gcnnnnn^nngc "NaeI" gcc^ggc "NarI" gg^cgcc "NciI" cc^sgg "NcoI" c^catgg "NdeI" ca^tatg "NdeII" ^gatc "NgoAIV" g^ccggc "NgoMI" g^ccggc "NheI" g^ctagc "NlaIII" catg^ "NlaIV" ggn^ncc "NotI" gc^ggccgc "NruGI" gacnnn^nngtc "NruI" tcg^cga "NsbI" tgc^gca "NsiI" atgca^t "NspBII" cmg^ckg "NspI" rcatg^y "NspV" tt^cgaa "PacI" ttaat^taa "PaeI" gcatg^c "PaeR7I" c^tcgag "PalI" gg^cc "PauI" g^cgcgc "Pfl23II" c^gtacg "PflFI" gacn^nngtc "PflMI" ccannnn^ntgg "PinAI" a^ccggt "Ple19I" cgat^cg "PmaCI" cac^gtg "Pme55I" agg^cct "PmeI" gttt^aaac "PmlI" cac^gtg "Ppu10I" a^tgcat "PpuMI" rg^gwccy "PshAI" gacnn^nngtc "PshBI" at^taat "Psp124BI" gagct^c "Psp1406I" aa^cgtt "Psp5II" rg^gwccy "PspAI" c^ccggg "PspEI" g^gtnacc "PspLI" c^gtacg "PspN4I" ggn^ncc "PspOMI" g^ggccc "PspPPI" rg^gwccy "PstI" ctgca^g "PvuI" cgat^cg "PvuII" cag^ctg "RcaI" t^catga "RsaI" gt^ac "RsrII" cg^gwccg "SacI" gagct^c "SacII" ccgc^gg "SalI" g^tcgac "SanDI" gg^gwccc "Sau3AI" ^gatc "Sau96I" g^gncc "SbfI" cctgca^gg "ScaI" agt^act "ScrFI" cc^ngg "SdaI" cctgca^gg "SduI" gdgch^c "SexAI" a^ccwggt "SfcI" c^tryag "SfiI" ggccnnnn^nggcc "Sfr274I" c^tcgag "Sfr303I" ccgc^gg "SfuI" tt^cgaa "SgfI" gcgat^cgc "SgrAI" cr^ccggyg "SinI" g^gwcc "SmaI" ccc^ggg "SmiI" attt^aaat "SmlI" c^tyrag "SnaBI" tac^gta "SpeI" a^ctagt "SphI" gcatg^c "SplI" c^gtacg "SrfI" gccc^gggc "Sse8387I" cctgca^gg "Sse9I" ^aatt "SseBI" agg^cct "SspBI" t^gtaca "SspI" aat^att "SstI" gagct^c "SstII" ccgc^gg "StuI" agg^cct "StyI" c^cwwgg "SunI" c^gtacg "SwaI" attt^aaat "TaiI" acgt^ "TaqI" t^cga "TfiI" g^awtc "ThaI" cg^cg "Tru1I" t^taa "Tru9I" t^taa "TscI" acgt^ "TseI" g^cwgc "Tsp45I" ^gtsac "Tsp509I" ^aatt "TspEI" ^aatt "TspRI" castgnn^ "Tth111I" gacn^nngtc "TthHB8I" t^cga "Van91I" ccannnn^ntgg "Vha464I" c^ttaag "VneI" g^tgcac "VspI" at^taat "XbaI" t^ctaga "XcmI" ccannnnn^nnnntgg "XhoI" c^tcgag "XhoII" r^gatcy "XmaCI" c^ccggg "XmaI" c^ccggg "XmaIII" c^ggccg "XmnI" gaann^nnttc "Zsp2I" atgca^t q